PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429635.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 340aa    MW: 37805.5 Da    PI: 7.5873
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.47.8e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l  +++q+G+++W++I++  g+ R++k+c++rw +yl
   XP_026429635.1 14 RGQWTPEEDNKLSAYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61
                     89********************************************97 PP
2Myb_DNA-binding46.86.9e-1568110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++ E++ +v+++   G++ W++Ia+ ++ gRt++++k++w++
   XP_026429635.1  68 GEFSESEEQTIVKLHSVVGNR-WSLIAAQLP-GRTDNDIKNHWNT 110
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGRIPCCEKD NVKRGQWTPE EDNKLSAYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY  60
LRPDLKHGEF SESEEQTIVK LHSVVGNRWS LIAAQLPGRT DNDIKNHWNT KLKKKLSGMG  120
IDPVTHKPFS HLMAEIATTL APPQVAHLTE AALGCFKDEM LHLLSKKRVA FQFQHSGISP  180
PRYDSLVHPN ANHPASTAYN NIAGKPDDRI DETIQKIKMS VSRAMQQEHE KPLTRPWPMI  240
TSTEETSDDG FMDGFPGSAS GFQYGPSSYG NEGDISSPWN QSICTGSNCT GGDQQNGLQD  300
KGKDREHTDI GAKSIGLKSS EFGADCVLWD LSNDLINPIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.11e-116MYB family protein