PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429911.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 202aa MW: 22472.8 Da PI: 9.4455

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.8	0.00021	13	70	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC............TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas.........kapskKlsKaeiLekAveYIksL 54 + +E++RR +++ ++L +l+ ++s ++++ + ++ A YI++L XP_026429911.1 13 KTIEKNRRIQMKALCFKLVSLVTPNSstvvpqkhsSNKDVCKTQIDQFDNAAAYIQEL 70 579********************96669999987655555577777788888888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MKTCKKSGTI DRKTIEKNRR IQMKALCFKL VSLVTPNSST VVPQKHSSNK DVCKTQIDQF 60 DNAAAYIQEL RKRINELKTK KQGMIHGGEQ EIISNNSSTS SSSSSSTSTM TATNLSGANL 120 PILEVKDFED AMVVVVVTGL NKDFMLYELI TILEEHGAEV VSASFATVND KIYHTIHSQV 180 RCSRLGVETT KIRDRLKELV YA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	3e-22	bHLH family protein