PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429947.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 268aa    MW: 30968.3 Da    PI: 6.7947
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox36.11.1e-1189161257
                     T--SS--HHHHHHHHHHHH.................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFe.................knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     r+++++++eq ++Le+ F+                 ++ ++  e++ +L++ l+L  rq+ +WFqNrRa+ k+
  XP_026429947.1  89 RRKRRLSSEQADALERSFQeeieleqqpgatlaemkNKVKLEPERKMRLSRDLELHPRQIAIWFQNRRARLKR 161
                     455589***************************997799*******************************997 PP
2HD-ZIP_I/II84.21.8e-271241971992
     HD-ZIP_I/II  19 eeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     +++ kLeperK++l+r+L+l+prq+a+WFqnrRAR k k++E+ y++Lk+ ++ +++en++L++ev +L+++l+
  XP_026429947.1 124 KNKVKLEPERKMRLSRDLELHPRQIAIWFQNRRARLKRKKIEQLYNVLKQDFEIVSRENQHLQDEVIKLKSKLD 197
                     4566******************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MANWNYCSST PQIPSPTTTT SGQQQQQENY VSSFLHDHHY HCESFDQPFP GLVGAEMTEL  60
WSSRANECKA ENGVEGHDAN INNQVQTGRR KRRLSSEQAD ALERSFQEEI ELEQQPGATL  120
AEMKNKVKLE PERKMRLSRD LELHPRQIAI WFQNRRARLK RKKIEQLYNV LKQDFEIVSR  180
ENQHLQDEVI KLKSKLDNRE TMQTSTRYVA QASPEEASLD KVATEKTRLS AAIQSTDDIR  240
QQGRTSNSNH VPECSTYWDV SPGHPQFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36610.16e-33HD-ZIP family protein