PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429984.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 103aa    MW: 11704.3 Da    PI: 10.5322
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.4e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrngilKKA+ELSvLC+ae+a+iifs+tgkl+e+ss
  XP_026429984.1 10 RIENATSRQVTFSKRRNGILKKAYELSVLCEAEIALIIFSPTGKLREFSS 59
                    8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MGRGKTEMGR IENATSRQVT FSKRRNGILK KAYELSVLCE AEIALIIFSP TGKLREFSSS  60
STSMQNTIER YQKHDADVKE NSQELRPFQR SFSPVVAFVS SIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.14e-37MIKC_MADS family protein