PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026430043.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 428aa    MW: 48539.9 Da    PI: 4.8752
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026430043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS130.61.7e-401032722177
            GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     +++Ll++Aea++++d  la  +++ l+ +    ++g +++ +l+++ft++L+ + ++  +el+ + p ++      +++++++++++e++P+lkf
  XP_026430043.1 103 TDVLLTAAEAIEAEDWLLAFIVVESLNSRliDRENGeNSFMKLVFFFTQGLHYKSFK-APELSPITPIQKP-----TDTMSVFQMLQELTPYLKF 191
                     679************************99875566669****************999.7888866666655.....5899999************ PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                     +h++aNqaIle ++g+ +vH+iDfd+ +G+QWp+L+  L sR++   slRiT+v+  +++s   +++tg+rL++fA ++ +pf+
  XP_026430043.1 192 AHFAANQAILETTKGDPEVHVIDFDVLEGIQWPPLMIDLVSRKGV--SLRITAVVG-DPTSMGYIRQTGRRLKEFAGSIYLPFR 272
                     ******************************************776..9*****998.778**********************95 PP
2GRAS65.31.2e-20278425225373
            GRAS 225 devLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekW 315
                     + +L+ v++lsPk+++++e+e    a+  s sF++ f++a+++y+al++sl ++  r  +   k+ +++++ +i + + +  +        +++W
  XP_026430043.1 278 NCFLNGVRKLSPKMIILTEEEilnlAKIPSMSFVDFFCKAFHHYTALYESLVTSC-RGYKVGLKLIEKVIELRILDSLKQFPFG----SSDKKSW 367
                     469******************8776677899********************9995.7777777777777**********99999....777899* PP

            GRAS 316 rerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +  +++  G+k++p+s+++++qak+l+  ++  gy v++e+  l l+Wk+rpL+s+  W
  XP_026430043.1 368 EGGFSAlKGYKAIPMSYHNVSQAKYLVGIFS-GGYWVQHEKCKLGLCWKSRPLISTIIW 425
                     ****9868**********************9.89**********************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
METIDIETLL AMEFDRVNGN DYLSYPDGTS MFEVDSLLNF NHIHAHDQDT ATGHLDLEKV  60
DVDIEFCLEM NPGVSECMDT VVEETCHVKE NIQEEFMEES GLTDVLLTAA EAIEAEDWLL  120
AFIVVESLNS RLIDRENGEN SFMKLVFFFT QGLHYKSFKA PELSPITPIQ KPTDTMSVFQ  180
MLQELTPYLK FAHFAANQAI LETTKGDPEV HVIDFDVLEG IQWPPLMIDL VSRKGVSLRI  240
TAVVGDPTSM GYIRQTGRRL KEFAGSIYLP FRNFASVNCF LNGVRKLSPK MIILTEEEIL  300
NLAKIPSMSF VDFFCKAFHH YTALYESLVT SCRGYKVGLK LIEKVIELRI LDSLKQFPFG  360
SSDKKSWEGG FSALKGYKAI PMSYHNVSQA KYLVGIFSGG YWVQHEKCKL GLCWKSRPLI  420
STIIWVPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.16e-33GRAS family protein