PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430292.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 351aa MW: 40057.6 Da PI: 6.9252

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll++++k++G g W++++ + g++R++k+c++rw++yl XP_026430292.1 15 KGAWDEEEDQLLKECIKEYGEGKWHLVPLRAGLNRCRKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	39.3	1.6e-12	68	110	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg + + E +l+++ +k+lG++ W++Ia +++ gRt++++k++++ XP_026430292.1 68 RGEFKPVEADLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYFN 110 79999***************.*****.********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MEGSSTVFSK RGVRKGAWDE EEDQLLKECI KEYGEGKWHL VPLRAGLNRC RKSCRLRWLN 60 YLHPNIKRGE FKPVEADLII RMHKLLGNRW SLIAGRLPGR TANDIKNYFN PHLKKTCFSK 120 YNTEKAQQDA LTKKLSHDNT THRDGQADHE QQKVPKLEYE QSVNTNLDPS FKTSTPNLLQ 180 EISVEIDEKM PTPTGMDNNS ITATARFPNN AQVVNNATRL SLSVDDHHDQ FSTTNGQHIH 240 DQGTNWLKNI LLGETEEEDS EKMKKPKKKK PITLTENTSL AFENTTTSGV EQGMSTKDKD 300 GGSDAYHCSL DGDQKLKEGG NAGDNDNYWN SYLHDNLWSI LREEQDHHLM I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MEGSSTVFSK RGVRKGAWDE EEDQLLKECI KEYGEGKWHL VPLRAGLNRC RKSCRLRWLN  60
YLHPNIKRGE FKPVEADLII RMHKLLGNRW SLIAGRLPGR TANDIKNYFN PHLKKTCFSK  120
YNTEKAQQDA LTKKLSHDNT THRDGQADHE QQKVPKLEYE QSVNTNLDPS FKTSTPNLLQ  180
EISVEIDEKM PTPTGMDNNS ITATARFPNN AQVVNNATRL SLSVDDHHDQ FSTTNGQHIH  240
DQGTNWLKNI LLGETEEEDS EKMKKPKKKK PITLTENTSL AFENTTTSGV EQGMSTKDKD  300
GGSDAYHCSL DGDQKLKEGG NAGDNDNYWN SYLHDNLWSI LREEQDHHLM I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-55	MYB family protein