PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026430338.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 26390.2 Da    PI: 8.0392
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026430338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.93.1e-293079251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s
  XP_026430338.1 30 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 79
                    8***********************************************96 PP
2K-box75.71.2e-2595184897
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +  ++++++l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq  e+qLe sl +iR+kKn+l++eqie+l+++e++l een+ L +k
  XP_026430338.1  95 KEVQENSQQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQEDQLLEENEVLWEK 184
                     334667899****************************************************************************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MKQHISFFRI SIFFGGETTI MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD  60
GEIALIVFSS TGKLYEFCST TSMQKTIERY QKYNKEVQEN SQQLKYEAVN LAKEIENLQT  120
SQRKLMGESL ESCSLDELQT AETQLEMSLL NIRTKKNQLY REQIEQLKQQ EDQLLEENEV  180
LWEKRSGITH FYVENKSLEL RNIMIQRSMY LIDYNFDDVL AAKPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.11e-55MIKC_MADS family protein