PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026430339.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 224aa    MW: 26349.2 Da    PI: 8.4367
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026430339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.93.1e-293079251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s
  XP_026430339.1 30 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 79
                    8***********************************************96 PP
2K-box67.73.9e-2387172691
           K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                      ++ ++ + e+l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq  e+qLe sl +iR+kKn+l++eqie+l+++    qe++
  XP_026430339.1  87 IERYQKYNKEQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEDQ 172
                     45577889999******************************************************************988888764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MKQHISFFRI SIFFGGETTI MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD  60
GEIALIVFSS TGKLYEFCST TSMQKTIERY QKYNKEQLKY EAVNLAKEIE NLQTSQRKLM  120
GESLESCSLD ELQTAETQLE MSLLNIRTKK NQLYREQIEQ LKQQHMTFQE DQLLEENEVL  180
WEKRSGITHF YVENKSLELR NIMIQRSMYL IDYNFDDVLA AKPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-58MIKC_MADS family protein