PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430342.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 210aa MW: 24693.1 Da PI: 7.4339

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.1	2.8e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s XP_026430342.1 10 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 59 8***********************************************96 PP
2	K-box	68.8	1.8e-23	75	158	8	91
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 + ++++++l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq e+qLe sl +iR+kKn+l++eqie+l+++ qe++ XP_026430342.1 75 KEVQENSQQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEDQ 158 334667899******************************************************************988888764 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD GEIALIVFSS TGKLYEFCST 60 TSMQKTIERY QKYNKEVQEN SQQLKYEAVN LAKEIENLQT SQRKLMGESL ESCSLDELQT 120 AETQLEMSLL NIRTKKNQLY REQIEQLKQQ HMTFQEDQLL EENEVLWEKR SGITHFYVEN 180 KSLELRNIMI QRSMYLIDYN FDDVLAAKPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	2e-61	MIKC_MADS family protein