PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430404.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 377aa MW: 43068.2 Da PI: 5.7948

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	57	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll +++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_026430404.1 57 RGPWTDEEDHLLTSYIANHGEGRWNSLAHAAGLKRTGKSCRLRWLNYL 104 89********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	110	153	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ +++++ q+G++ W++Ia++++ gRt++++k++w++ XP_026430404.1 110 RGNITPEEQLMILELHSQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 153 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MYSSSTTTMN NNRRSAGGGG DSSSSSTTMT TTQSSSDNED VMMAMDYEQQ EDLDLRRGPW 60 TDEEDHLLTS YIANHGEGRW NSLAHAAGLK RTGKSCRLRW LNYLRPDVRR GNITPEEQLM 120 ILELHSQWGN RWSKIAQYLP GRTDNEIKNY WRTRVQKHAK QLRCDVNSKL FKDTMRNVWM 180 PRLAERIQAA ADGTSLESTN TITGHHFNNN IDFTSVAEST NINDMGMINT NRTNRRRSIK 240 SEDNYTTAKV PASSSTADSL WTNTVTTQVP SPVSDLTYDQ YQYPFETNCE STTTQTSHIM 300 NYPDYIMPSP IGYNLNHDFN FQGCTTSSAH EQQNMSNISG NWLGSDTSST ITQDNSLWDY 360 LWNPNQDIMF IQQQQQF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MYSSSTTTMN NNRRSAGGGG DSSSSSTTMT TTQSSSDNED VMMAMDYEQQ EDLDLRRGPW  60
TDEEDHLLTS YIANHGEGRW NSLAHAAGLK RTGKSCRLRW LNYLRPDVRR GNITPEEQLM  120
ILELHSQWGN RWSKIAQYLP GRTDNEIKNY WRTRVQKHAK QLRCDVNSKL FKDTMRNVWM  180
PRLAERIQAA ADGTSLESTN TITGHHFNNN IDFTSVAEST NINDMGMINT NRTNRRRSIK  240
SEDNYTTAKV PASSSTADSL WTNTVTTQVP SPVSDLTYDQ YQYPFETNCE STTTQTSHIM  300
NYPDYIMPSP IGYNLNHDFN FQGCTTSSAH EQQNMSNISG NWLGSDTSST ITQDNSLWDY  360
LWNPNQDIMF IQQQQQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	7e-83	MYB family protein