PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026430620.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 283aa    MW: 32765.7 Da    PI: 8.651
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026430620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-16181002098
                     HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS...SEE..EEEEE- CS
              B3  20 kkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr...sefelvvkvfr 98 
                      kfa+eh   +  ++ ++ + l++e+g sWev +  +  +++y++++GWk+F  +n+Lk gD v+F+l++r   s+f ++++++r
  XP_026430620.1  18 YKFAREHlaaEVTNPYGVAVLLQNEEGLSWEVLV--KPAGRKYTFGAGWKHFSTDNKLKIGDCVIFELIDRlpdSTFAMNFHICR 100
                     689999999865666889****************..*******************************997652355666777776 PP
2B364.22e-20172268198
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f + ++ps+vl   r+++p kfa+eh     g  +e+   + l++ +grsWe++ + +++ + y+l +GWk+F+ +n+L+ gD ++F+l+gr  +
  XP_026430620.1 172 FRTSMKPSSVL---RMYIPVKFAREHlptkcG--EERMDHVLLQNVEGRSWELRASLSGC-ENYYLHRGWKKFATDNKLNIGDCLLFELIGRlPD 260
                     55667777777...589***********9754..445568***************54444.469****************************766 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                     +  +v++fr
  XP_026430620.1 261 A-TFVMIFR 268
                     6.6777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MNTGNSVFNY TSTFYRQYKF AREHLAAEVT NPYGVAVLLQ NEEGLSWEVL VKPAGRKYTF  60
GAGWKHFSTD NKLKIGDCVI FELIDRLPDS TFAMNFHICR IPVPVPSPFP AQERKRCGKA  120
CENSTIRKDW LHSPHRNTRL IIIYVFQFPE KFASAIAFES KVNSFSSPFH FFRTSMKPSS  180
VLRMYIPVKF AREHLPTKCG EERMDHVLLQ NVEGRSWELR ASLSGCENYY LHRGWKKFAT  240
DNKLNIGDCL LFELIGRLPD ATFVMIFRIS RIPVFVDDDL DDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.18e-12B3 family protein