PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430717.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 349aa MW: 39074.7 Da PI: 6.4204

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.2	4.2e-20	13	104	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ + +++rl++p f+++ ++++++ +l+ ++g sW v++ +k+ ++++l++GW++Fv++n Lk Df+vF++dg ++f +v XP_026430717.1 13 FFKIF--HEEDQKRRLRIPVAFCQRLpTESPACG-RAILQCPNGASWVVQV--NKTENGTYLEDGWEKFVQENCLKKYDFLVFRHDGGMQF--LV 100 78888..66777788******99975555665.8999********..****************************999999.. PP EEE- CS B3 95 kvfr 98 kvf+ XP_026430717.1 101 KVFK 104 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MKMEAAAERK HHFFKIFHEE DQKRRLRIPV AFCQRLPTES PACGRAILQC PNGASWVVQV 60 NKTENGTYLE DGWEKFVQEN CLKKYDFLVF RHDGGMQFLV KVFKGNGCPR EECFARVPSP 120 VLAPERYVPK EECFTPVPSQ VLAPESDEPN EEWFAPVPSP ILGPESHGSK VKCFAPVLSP 180 IPEQESHGPK EEEACLIPVA SPIPGQESLG PKQECSTPIA SPIPAQESHG SKEECFTPVA 240 SPIPAEESHG PQEEFVTFIP SPLGQGRKRH GISCESSTRK RRGTVNEEML APAIVVKRKV 300 LSFSNMYYPL VVYKRGTAFN QLYIKDSRIE SSIFQFSLSF LLELCEGLL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MKMEAAAERK HHFFKIFHEE DQKRRLRIPV AFCQRLPTES PACGRAILQC PNGASWVVQV  60
NKTENGTYLE DGWEKFVQEN CLKKYDFLVF RHDGGMQFLV KVFKGNGCPR EECFARVPSP  120
VLAPERYVPK EECFTPVPSQ VLAPESDEPN EEWFAPVPSP ILGPESHGSK VKCFAPVLSP  180
IPEQESHGPK EEEACLIPVA SPIPGQESLG PKQECSTPIA SPIPAQESHG SKEECFTPVA  240
SPIPAEESHG PQEEFVTFIP SPLGQGRKRH GISCESSTRK RRGTVNEEML APAIVVKRKV  300
LSFSNMYYPL VVYKRGTAFN QLYIKDSRIE SSIFQFSLSF LLELCEGLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	282	RKRHGISCESSTRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57720.1	3e-13	B3 family protein