PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430718.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 347aa MW: 38883.5 Da PI: 6.4207

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.2	2.1e-20	11	102	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ + k++rl++p f+++ ++++++ +l+ ++g sW v++ +k+ ++++l++GW++Fv++n Lk Df+vF++dg ++f +v XP_026430718.1 11 FFKIF--HEEEKRRRLRIPVAFCQRLpTESPACG-RAILQCPNGASWVVQV--NKTENGTYLEDGWEKFVQENCLKKYDFLVFRHDGGMQF--LV 98 78888..8899999*******99975555665.8999********..****************************999999.. PP EEE- CS B3 95 kvfr 98 kvf+ XP_026430718.1 99 KVFK 102 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEPAAERKHH FFKIFHEEEK RRRLRIPVAF CQRLPTESPA CGRAILQCPN GASWVVQVNK 60 TENGTYLEDG WEKFVQENCL KKYDFLVFRH DGGMQFLVKV FKGNGCPREE CFARVPSPVL 120 APERYVPKEE CFTPVPSQVL APESDEPNEE WFAPVPSPIL GPESHGSKVK CFAPVLSPIP 180 EQESHGPKEE EACLIPVASP IPGQESLGPK QECSTPIASP IPAQESHGSK EECFTPVASP 240 IPAEESHGPQ EEFVTFIPSP LGQGRKRHGI SCESSTRKRR GTVNEEMLAP AIVVKRKVLS 300 FSNMYYPLVV YKRGTAFNQL YIKDSRIESS IFQFSLSFLL ELCEGLL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEPAAERKHH FFKIFHEEEK RRRLRIPVAF CQRLPTESPA CGRAILQCPN GASWVVQVNK  60
TENGTYLEDG WEKFVQENCL KKYDFLVFRH DGGMQFLVKV FKGNGCPREE CFARVPSPVL  120
APERYVPKEE CFTPVPSQVL APESDEPNEE WFAPVPSPIL GPESHGSKVK CFAPVLSPIP  180
EQESHGPKEE EACLIPVASP IPGQESLGPK QECSTPIASP IPAQESHGSK EECFTPVASP  240
IPAEESHGPQ EEFVTFIPSP LGQGRKRHGI SCESSTRKRR GTVNEEMLAP AIVVKRKVLS  300
FSNMYYPLVV YKRGTAFNQL YIKDSRIESS IFQFSLSFLL ELCEGLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	24	KRRRL
2	265	280	RKRHGISCESSTRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57720.1	1e-13	B3 family protein