PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430850.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 360aa MW: 40930 Da PI: 6.1713

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.1	7.4e-14	2	56	35	90
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ++ l++ +g sWe+ l+ +++ +y+++kGW+ F+k+n+L+ gD vvF+l++r+ + XP_026430850.1 2 DVLLQNVEGCSWELHLC-SRGFAKYYFSKGWRTFAKENKLNIGDCVVFELIDRHPA 56 6899**********4.555567************************987554 PP
2	B3	39.1	1.4e-12	66	131	35	98
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS...SEE..EEEEE- CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr...sefelvvkvfr 98 ++ l++e+g sWev ++ ++ ++y++ +GWk+F+ +n+Lk g v+F+l++r s+f ++++++r XP_026430850.1 66 DVLLQNEEGLSWEVLVR-PNGLDQYIFCTGWKDFATDNKLKIGNYVIFELIDRlpdSTFAMNFRICR 131 689***********3.44445699999******************997652245556666665 PP
3	B3	50	5.3e-16	215	301	8	94
-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 8 sdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 s+v+ + +p kf +eh g +e + l++ +grsW+++ + ++ ++y l +GWk F+ +n+L+ gD+v+F+l+gr ++++v+ XP_026430850.1 215 SNVTC---INIPVKFGREHlptkcG--EEIMDHVLLQNVEGRSWDLRAKLFGC-DMYRLNTGWKTFATDNKLNIGDSVLFELIGRlPDATFVM 301 44443...56*******999653..44556799*********75555.59**************************988887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDVLLQNVEG CSWELHLCSR GFAKYYFSKG WRTFAKENKL NIGDCVVFEL IDRHPAEVTN 60 PDGVLDVLLQ NEEGLSWEVL VRPNGLDQYI FCTGWKDFAT DNKLKIGNYV IFELIDRLPD 120 STFAMNFRIC RISVPVPSPV RVQESAGPQE ACFTRLPSSL LAQEIKSRGR GCENTTIRKG 180 GSDNHEKLAS AIAAESKVNS FSSPFPSFWT IVKPSNVTCI NIPVKFGREH LPTKCGEEIM 240 DHVLLQNVEG RSWDLRAKLF GCDMYRLNTG WKTFATDNKL NIGDSVLFEL IGRLPDATFV 300 MNFHIYEFQT LLTMIWMMNE AALRPGVSNV LLNYFAASPY VFIRGHTETY VILWDSYICF

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDVLLQNVEG CSWELHLCSR GFAKYYFSKG WRTFAKENKL NIGDCVVFEL IDRHPAEVTN  60
PDGVLDVLLQ NEEGLSWEVL VRPNGLDQYI FCTGWKDFAT DNKLKIGNYV IFELIDRLPD  120
STFAMNFRIC RISVPVPSPV RVQESAGPQE ACFTRLPSSL LAQEIKSRGR GCENTTIRKG  180
GSDNHEKLAS AIAAESKVNS FSSPFPSFWT IVKPSNVTCI NIPVKFGREH LPTKCGEEIM  240
DHVLLQNVEG RSWDLRAKLF GCDMYRLNTG WKTFATDNKL NIGDSVLFEL IGRLPDATFV  300
MNFHIYEFQT LLTMIWMMNE AALRPGVSNV LLNYFAASPY VFIRGHTETY VILWDSYICF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	7e-10	B3 family protein