PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430970.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 308aa MW: 35141.9 Da PI: 7.5708

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.2	1.9e-10	24	116	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ++g + lp +f+++++++ + +l+ ++g +W++k++ ++++g++++++G +F + + g f+vF++dg+ +f +v +f+ XP_026430970.1 24 NAIIQNGSFELPTQFVKRIEKDLVDDSIAILRVSNGGEWRIKMTRvsdvNNGGGGVWFRTGIVKFIDYYSMSPGHFLVFRYDGNLQF--HVLIFD 116 5566789999*******66666777899999******878998999999************************998888..999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MGETTEWSSL REEQRPKFSI IIHNAIIQNG SFELPTQFVK RIEKDLVDDS IAILRVSNGG 60 EWRIKMTRVS DVNNGGGGVW FRTGIVKFID YYSMSPGHFL VFRYDGNLQF HVLIFDMTGN 120 EIDYHLYAGN DPSEHFNDID NSYNIESFKT KEDVHYVEIS SGSPTDTDES AKDDVAKKPS 180 CSSKNNRSKS PNTKDYVVRA DAIVGGFTSR YPFFRVIMQI SYLKHCYMPI PFGIGRMYFS 240 DDVTEFKVEA SDGRLWKIGV VRSKTGDMRF CKGVSTLVKK NGLNLKLGDV LIFEIVEKRC 300 LKVNVFSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-21	B3 family protein