PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431038.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 861aa MW: 93031.8 Da PI: 7.9641

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.9e-08	710	758	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqkyl 48 +WT E +lv++v+++G g+W+ I +++g Rt ++k++w+++l XP_026431038.1 710 AWTLSEVTQLVEGVAKFGAGRWSEI-KKLGftsySYRTSVDLKDKWRNLL 758 7*********************9.5677799999**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 861 aa Download sequence
MVTMAVVDGN EELGRNESLG GKDGVSLLSS NEIADPVVYK LVRVDGDGRI ISATDDDVME 60 VDDFLEEDKS ELLPIVVDTR QAKECILNEA GVLPVRNNLL GSEGISNNVE VKLQELKAPL 120 EETVPLVSHG VNDKSTTQVG VEMCMKPSGF LKICGPSSLA SATCSSSMLR ISNNADVKVH 180 KLKALLEESA PLVSHGVNDK CNTQLGVEMC MKPAGFLKIC GPSSLASVTC SSSMLGISNS 240 AEVLPASDPS SQDTVPMVSH GVNDKCATQA GVEMCLKPTR FLKICGPSSL ASVTCSSSML 300 GVPNNAEVKV QKLKAALEET VPLVSPGVNE KCTTQVQGET CLKPADALRI SEKPADALRI 360 SESSSSASAS CSSLIPDFSK IKGEICLDNL SVKELHGTFR ATFGRETTVK DKLWLKRRIA 420 MGLTNSCDVA TSTFTIKDKT LIRRKKIEEG APSEIKCSKS EDQVDGIFKG SHKDSPITPA 480 NKVGDEQVSG KRLRKSDAED EYICEDPHNE HSKRVRKPTK RYIEELSKDD NSECSGKPVS 540 SVKSSGNCQS DPKPQVKPVQ SVGLDRPVVV TRQESFGGSG VQVPYVSRVR RGRPRENFMP 600 LMKFHPGSMG VDAKLITKTL DECVSQPDNE NGDKDLKAKL APQQSEQPIA SDQKKEEEED 660 KENHNDVKTC ISVEQQVETK NLDLAEDNSD HNVRIQSTTK GEPVRKHHRA WTLSEVTQLV 720 EGVAKFGAGR WSEIKKLGFT SYSYRTSVDL KDKWRNLLRA SYAHPPAVRD MLNSKKQASA 780 ALPAHILSRV RELAEKYSQG PPPELGRKVG SIRGRKPGAG GGIFGRKIVG GVKVSHKVGK 840 VAGVVSAGSR PIVNEARSGF L

Sequence ? help Back to Top

Protein Sequence Length: 861 aa Download sequence

MVTMAVVDGN EELGRNESLG GKDGVSLLSS NEIADPVVYK LVRVDGDGRI ISATDDDVME  60
VDDFLEEDKS ELLPIVVDTR QAKECILNEA GVLPVRNNLL GSEGISNNVE VKLQELKAPL  120
EETVPLVSHG VNDKSTTQVG VEMCMKPSGF LKICGPSSLA SATCSSSMLR ISNNADVKVH  180
KLKALLEESA PLVSHGVNDK CNTQLGVEMC MKPAGFLKIC GPSSLASVTC SSSMLGISNS  240
AEVLPASDPS SQDTVPMVSH GVNDKCATQA GVEMCLKPTR FLKICGPSSL ASVTCSSSML  300
GVPNNAEVKV QKLKAALEET VPLVSPGVNE KCTTQVQGET CLKPADALRI SEKPADALRI  360
SESSSSASAS CSSLIPDFSK IKGEICLDNL SVKELHGTFR ATFGRETTVK DKLWLKRRIA  420
MGLTNSCDVA TSTFTIKDKT LIRRKKIEEG APSEIKCSKS EDQVDGIFKG SHKDSPITPA  480
NKVGDEQVSG KRLRKSDAED EYICEDPHNE HSKRVRKPTK RYIEELSKDD NSECSGKPVS  540
SVKSSGNCQS DPKPQVKPVQ SVGLDRPVVV TRQESFGGSG VQVPYVSRVR RGRPRENFMP  600
LMKFHPGSMG VDAKLITKTL DECVSQPDNE NGDKDLKAKL APQQSEQPIA SDQKKEEEED  660
KENHNDVKTC ISVEQQVETK NLDLAEDNSD HNVRIQSTTK GEPVRKHHRA WTLSEVTQLV  720
EGVAKFGAGR WSEIKKLGFT SYSYRTSVDL KDKWRNLLRA SYAHPPAVRD MLNSKKQASA  780
ALPAHILSRV RELAEKYSQG PPPELGRKVG SIRGRKPGAG GGIFGRKIVG GVKVSHKVGK  840
VAGVVSAGSR PIVNEARSGF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-93	MYB_related family protein