PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431273.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 336aa MW: 39463.3 Da PI: 6.1435

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.5	7.8e-16	20	102	11	97
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 + + r+++p f ++++++++ +l +sg W k+ +k++++++l kGW+ Fv+ ng++ Df+vF+++g+++f +kvf XP_026431273.1 20 GDLTRMRIPEAFYPRISKDSQSCERAVLWGPSGTHWVAKV--KKSQDGIYLDKGWEVFVQVNGIQKYDFLVFRYEGSMQF--SIKVF 102 4456899*******888888889***********..*******************************99999..66666 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MRKFVDPDRK HHFFKVLLEG DLTRMRIPEA FYPRISKDSQ SCERAVLWGP SGTHWVAKVK 60 KSQDGIYLDK GWEVFVQVNG IQKYDFLVFR YEGSMQFSIK VFNMHGVPRE ECFTPDRSSP 120 LVEERIRHGR SFDCPPVGRP STNLRSRKRR CVELQERVQQ DRDESDEDKS DEKDKSDEDE 180 WDEDESDEGE SDEDESDEDE SDEDGLDEED EDCVARTNGR KCGLSSRSRS AFFRILMRPA 240 YLKHNYVPIP RGIRRAYFLD DVKKVIIMPS DASYDREWRI RILHTKTDMR LSKGVPDFIK 300 KKNGLNLKAG DVCHFEIVEK RSYKLVLRVQ VFRNCA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	175	RKRRCVELQERVQQDRDESDEDKSDEKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	3e-11	B3 family protein