PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431283.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 241aa    MW: 28074.6 Da    PI: 4.439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.44e-1614102297
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fkvl+    + + r+++p  f  ++++++++    +l  +sg  W  k+  +k++++++l kGW+ Fv+ ng++  Df+vF+++g+++f   +kv
  XP_026431283.1  14 FKVLL---EGDLTRMRIPEAFYPRISKDSQSCERAVLWGPSGTHWVAKV--KKSQDGIYLDKGWEVFVQVNGIQKYDFLVFRYEGSMQF--SIKV 101
                     55552...34456899*********888888889***************..*********************************99999..6666 PP

                     E CS
              B3  97 f 97 
                     f
  XP_026431283.1 102 F 102
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MRKFVDPDRK HHFFKVLLEG DLTRMRIPEA FYPRISKDSQ SCERAVLWGP SGTHWVAKVK  60
KSQDGIYLDK GWEVFVQVNG IQKYDFLVFR YEGSMQFSIK VFNMHGVPRE ECFTPDRSSP  120
LVEERIRHGR SFDCPPVGRP STNLRSRKRR CVELQERVQQ DRDESDEDKS DEKDKSDEDE  180
WDEDESDEGE SDEDESDEDE SDEDGLDEED EDCVARTNGR KCGLSSSQSH GASEERTSWM  240
T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147175RKRRCVELQERVQQDRDESDEDKSDEKDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18090.12e-11B3 family protein