PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431351.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 174aa    MW: 19906.8 Da    PI: 8.6508
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.92.7e-131549135
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaev 35
                    kri n+  rq+ fskR+ g++KKA+EL + C+  v
  XP_026431351.1 15 KRIRNEKARQIAFSKRKGGVFKKAHELGTVCGDSV 49
                    79*****************************8666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MARKPSMGKK YIQIKRIRNE KARQIAFSKR KGGVFKKAHE LGTVCGDSVI DHYLSGDTLD  60
RTPTPPVMPH REARILELNR EYSEELERLE TEKKRGPAVG KITEANKSKR WWEWDYIDDS  120
GEEELEILCG ALDVLKLKIA EDVDKLWFTT THISSLPHFG YGVGFGLDKG NALY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-13M-type_MADS family protein