PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431365.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 442aa MW: 50060.2 Da PI: 5.8294

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27	7.8e-09	222	280	3	56
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 + +++t+eq +Le l+ r p+ +++ +++k+l + + +V+ WF ++a e+ XP_026431365.1 222 SQWRPTSEQKSILELLYDCgLRCPTMQQIIQITKQLsqcgNTEGIDVYGWFRAHKAEER 280 579*************99**********************************998 PP
2	Wus_type_Homeobox	43.7	6.5e-15	121	180	7	65
Wus_type_Homeobox 7 tPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedk.NVfyWFQNrkaRerqkq 65 Ptpe iLe ly++Gl+ P+ ++++i ++L+eyG+ie++ V WF r+a er+ q XP_026431365.1 121 EPTPEHNIILELLYECGLVEPTMGQMEQIIKQLSEYGRIEGTgGVSQWFRARQAEERREQ 180 59************************************9846***********975 PP
3	Wus_type_Homeobox	60	5.4e-20	221	281	3	63
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 ++ W Pt+eQ iLe ly++Glr P+ ++i +it++L++ G+ e+ V+ WF +ka er XP_026431365.1 221 ESQWRPTSEQKSILELLYDCGLRCPTMQQIIQITKQLSQCGNTEGIDVYGWFRAHKAEERP 281 689******************************************************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MAFWWLWIVV TLAYIILKIL LAIYYYFVRE RPRNVPSTAD IKVFDVSYDG KKTRGKRGNA 60 SKKGSSGKED IDAENELLKE TKLQKIASIL KYTGSIIATM VERSKQIRTD GHSGNNPPCL 120 EPTPEHNIIL ELLYECGLVE PTMGQMEQII KQLSEYGRIE GTGGVSQWFR ARQAEERREQ 180 ASSSLIPTST EGLKPNIRGM DMDKLLSTER LLSEPENLPT ESQWRPTSEQ KSILELLYDC 240 GLRCPTMQQI IQITKQLSQC GNTEGIDVYG WFRAHKAEER PEQASSNLVP TSTEELKQIE 300 TSPTSSGVTE RDKGKAIAVE DKSGTGKVRI PSEISSHVSQ EQENSDNSRY DSTGKRLPIN 360 IEKQREQIPD SEGNIDVRAN IIFLDRDHLE ESDPHIPNQQ ETVSPSATST EGEESRSGGQ 420 NSTEAVPKRR RWFKPFSWWQ RK

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MAFWWLWIVV TLAYIILKIL LAIYYYFVRE RPRNVPSTAD IKVFDVSYDG KKTRGKRGNA  60
SKKGSSGKED IDAENELLKE TKLQKIASIL KYTGSIIATM VERSKQIRTD GHSGNNPPCL  120
EPTPEHNIIL ELLYECGLVE PTMGQMEQII KQLSEYGRIE GTGGVSQWFR ARQAEERREQ  180
ASSSLIPTST EGLKPNIRGM DMDKLLSTER LLSEPENLPT ESQWRPTSEQ KSILELLYDC  240
GLRCPTMQQI IQITKQLSQC GNTEGIDVYG WFRAHKAEER PEQASSNLVP TSTEELKQIE  300
TSPTSSGVTE RDKGKAIAVE DKSGTGKVRI PSEISSHVSQ EQENSDNSRY DSTGKRLPIN  360
IEKQREQIPD SEGNIDVRAN IIFLDRDHLE ESDPHIPNQQ ETVSPSATST EGEESRSGGQ  420
NSTEAVPKRR RWFKPFSWWQ RK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	2e-17	WOX family protein