PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431369.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 234aa    MW: 27112.6 Da    PI: 9.3836
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.95.4e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev ++ifsstgklye+s+
  XP_026431369.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCEAEVGLMIFSSTGKLYEFSN 59
                    9***********************************************95 PP
2K-box805.8e-2782170997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++++a+ +++e+a L+ +++nLq+++R+l+G++L+ Ls keLq+Le+qLe sl+ +R +K++ l+++i+el +k + l++en++L kk
  XP_026431369.1  82 NANSDAKFWKTEAASLRHQLQNLQENHRQLMGQELSGLSAKELQNLENQLEMSLRGVRMQKDQKLTDEIQELNRKGNLLHQENMELFKK 170
                     678899********************************************************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGRGKIVIQR IDNSTSRQVT FSKRRNGLLK KAKELSILCE AEVGLMIFSS TGKLYEFSNP  60
NMKSIIGRYN KSKEEQHHPL MNANSDAKFW KTEAASLRHQ LQNLQENHRQ LMGQELSGLS  120
AKELQNLENQ LEMSLRGVRM QKDQKLTDEI QELNRKGNLL HQENMELFKK EHHIRQEHVD  180
LLKKINEAKD ANETNRISHS PNGFNPEEDE FIKLQLSQPQ QQNYVTPENP TTPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-93MIKC_MADS family protein