PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431520.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 340aa MW: 39146 Da PI: 8.27

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed ll ++++++G g W ++r+ g++R++k+c++rw++yl XP_026431520.1 25 KGAWSQAEDVLLRECIEKYGIGEWYQVPRRAGLNRCRKSCRLRWLNYL 72 79********************************************97 PP
2	Myb_DNA-binding	42.2	1.9e-13	78	123	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l ++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026431520.1 78 RGEFKPDEVDLVIRMHKLLGNR-WTLIAGRIP-GRTANDIKNYYNTHL 123 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MHRPNFEVGS SSGKTSSLSK ITLKKGAWSQ AEDVLLRECI EKYGIGEWYQ VPRRAGLNRC 60 RKSCRLRWLN YLQPNIYRGE FKPDEVDLVI RMHKLLGNRW TLIAGRIPGR TANDIKNYYN 120 THLLKKTSSS KHNVEGKNQI SITKKISHDD NVVRDHLEDL DQHTHPCPNT SATSSMTKVI 180 RSVPRTFPST YKWISNEATS TGMNPNNITT TTTNNNRLVT KNNDREEMIK NTYLSVDDYL 240 CHLELKDEGQ VNNMNTSLFD ETKSKDIEVG DEDREKQKQK KLMTTTYDNN ALFGDGNSTS 300 INLEDGMMMK GHTNKSNFYC WDDFYLHDNL CDVLGDLYQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	9e-53	MYB family protein