PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431542.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 276aa    MW: 31392.9 Da    PI: 6.8015
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox42.51.1e-1370143256
                     T--SS--HHHHHHHHHHHH...................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFe...................knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+t +t+eq+++Le+ F+                   +  +++ e++ +L+k+lgL  rqV +WFqNrRa+ k
  XP_026431542.1  70 RKKTMLTSEQVDALERSFRdeikleeqqstgrftelrkNRVKLDPERKMKLSKELGLHPRQVATWFQNRRARLK 143
                     899********************************996799*******************************88 PP
2HD-ZIP_I/II80.13.4e-261071722084
     HD-ZIP_I/II  20 eee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 
                     +++ kL+perK++l++eLgl+prqva WFqnrRAR k kqlE+ y++L++ y+ +++e+++L++e 
  XP_026431542.1 107 KNRvKLDPERKMKLSKELGLHPRQVATWFQNRRARLKGKQLERLYNVLQQDYEVVSREKQHLQQEG 172
                     3445***********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAKYVYSTDD EVNDLQIPFS IVDTTSAGGG EQQQNFVSGG HHYPYDYFAS HPFPGVHAAN  60
IIDHQVNMTR KKTMLTSEQV DALERSFRDE IKLEEQQSTG RFTELRKNRV KLDPERKMKL  120
SKELGLHPRQ VATWFQNRRA RLKGKQLERL YNVLQQDYEV VSREKQHLQQ EGITICTYTK  180
VLELKEKLDG RQSMKASIGY MEHGSQVQAE SNVDDNGSIR TSSAVQCSND VEQRRTSNSN  240
TQISGRNSYF LSDDATGGTR GWLTLAPAAG MELHED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138146RRARLKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36610.18e-33HD-ZIP family protein