PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431749.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 430aa MW: 48138.4 Da PI: 6.821

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ ++ + G+g +W + ++++g++R++k+c++rw++yl XP_026431749.1 14 RGPWSPEEDSKLKSYIDENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38.2	3.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_026431749.1 69 GGFSEEEDNIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDSKLKSYID ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEHQSRRV NAHLKQEMMK KAGNDVHFMM NTTADNNNKM NGTTHQNHPQ NLYFPQPVPT 180 SAPQLDSALN DHTSIRKLLI KLGGRFSDIQ DHHLQQGLDN NKLKNISFYT PTQDVPSTQQ 240 VYGGHDPHNS SMDWFSSSMN YSSINTNNDS SCADELFLNN SCDIVDDDGM NMHEMLVSDD 300 GLNSCFPIDH EHLGDDDHSM PALCRNAKME SSSVIDHYDQ AGSSSTELLY GSSSMAMENE 360 SSSSTPGTHI DITKASSSGG NGTSWVHVDR HMRPFMYANT IPTVTTTGFG SSQQQPPPQQ 420 QRVLQEYGLN

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MGRAPCCDKA NVKRGPWSPE EDSKLKSYID ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEHQSRRV NAHLKQEMMK KAGNDVHFMM NTTADNNNKM NGTTHQNHPQ NLYFPQPVPT  180
SAPQLDSALN DHTSIRKLLI KLGGRFSDIQ DHHLQQGLDN NKLKNISFYT PTQDVPSTQQ  240
VYGGHDPHNS SMDWFSSSMN YSSINTNNDS SCADELFLNN SCDIVDDDGM NMHEMLVSDD  300
GLNSCFPIDH EHLGDDDHSM PALCRNAKME SSSVIDHYDQ AGSSSTELLY GSSSMAMENE  360
SSSSTPGTHI DITKASSSGG NGTSWVHVDR HMRPFMYANT IPTVTTTGFG SSQQQPPPQQ  420
QRVLQEYGLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	2e-81	MYB family protein