PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431916.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 241aa    MW: 26943.7 Da    PI: 8.0199
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.12.4e-232064145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    k+i+nk nrqvtfskRr+g++ KA+EL+vLC+ae+a+i+fs+  k
  XP_026431916.1 20 KKIDNKANRQVTFSKRRTGLFTKASELCVLCGAEIALIVFSPARK 64
                    68***************************************9766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAKPINERKK SCGRKKIEIK KIDNKANRQV TFSKRRTGLF TKASELCVLC GAEIALIVFS  60
PARKAFVFGH PDPRYVLNRF LTGQEDGAVT QFYNERLVPY QQQGMEAAKQ SDFEKKKGIA  120
VEKLRNLNAD GFWWDAPMDG LSLKELELMK SAMEDLQAAL LKRLNEMMLN EMASKEDSSL  180
SSMLVPYTGE NDTFVNSSDQ ASTTGLDADT FGFNDAFLNT SQTSPSSPGK SYDISGLFKD  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-37M-type_MADS family protein