PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431988.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 492aa MW: 55648.3 Da PI: 6.8725

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	68.2	1.3e-21	182	234	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+ W eLH +F+ a e+L G++kA+P++il m+v+gLt+e+++SHLQkYR XP_026431988.1 182 ARIAWDLELHGKFLAAFEKL-GPDKAVPSKILSEMGVPGLTREKIASHLQKYRN 234 79****************.******************************6 PP
2	Myb_DNA-binding	32.5	2e-10	185	233	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +W e++ +++ a+++lG++ +++I ++mg g+t++ + s++qky+ XP_026431988.1 185 AWDLELHGKFLAAFEKLGPDkaVPSKILSEMGvPGLTREKIASHLQKYR 233 7***************99**************************7 PP
3	Response_reg	67.7	5.3e-23	15	125	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEE..SSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillD..iempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vdD+p+ ++ ++ +l++ +y ev+ +++e+al+ll+e++ +D++++D em + dG++ll+ i + ++p+i+++++++ +++ + +k XP_026431988.1 15 VLVVDDSPSCLKFIEGLLKSCRY-EVTKETSAESALNLLRENKnnFDIVITDvqFEMGKDDGFKLLEIIGLQM-DIPVIMMSSSNDYDTVMKGVK 107 89*******************.***********888888***5556999******5544.7**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+++Kp + e+ + XP_026431988.1 108 HGACDYIVKPASLTEIQN 125 *********9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEKKNEYKFP EGLRVLVVDD SPSCLKFIEG LLKSCRYEVT KETSAESALN LLRENKNNFD 60 IVITDVQFEM GKDDGFKLLE IIGLQMDIPV IMMSSSNDYD TVMKGVKHGA CDYIVKPASL 120 TEIQNIYQHV LRKNESSVID QKSEKQEIDQ NSKKRNNNQM KNNEDDTNSH SSDEQFSTHK 180 RARIAWDLEL HGKFLAAFEK LGPDKAVPSK ILSEMGVPGL TREKIASHLQ KYRNYLKKNR 240 EQKYSNNIRD NGINGHLRNS TFDVSYFGNR ESGIHGNSGL SLLSHHSMNP NPMNRSFVSS 300 QTQFHSLNQH ALPQHQFSYG RGAANQNYQR SQVRDPLMTR SLHNQTYMNG LKAQTFSSGP 360 YTENTYSKIP EHNTNIDSRV SSFLLFGGTP GLPKNNLFDV PGYLMPDGAS LSNLTTVFHN 420 DSMVNMVHTS LSVKDEMKNI IPLSVPSSNA EECPRIDQIS SLEELLETDA FCNFSSSSST 480 DEDLSVVFKR FQ

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEKKNEYKFP EGLRVLVVDD SPSCLKFIEG LLKSCRYEVT KETSAESALN LLRENKNNFD  60
IVITDVQFEM GKDDGFKLLE IIGLQMDIPV IMMSSSNDYD TVMKGVKHGA CDYIVKPASL  120
TEIQNIYQHV LRKNESSVID QKSEKQEIDQ NSKKRNNNQM KNNEDDTNSH SSDEQFSTHK  180
RARIAWDLEL HGKFLAAFEK LGPDKAVPSK ILSEMGVPGL TREKIASHLQ KYRNYLKKNR  240
EQKYSNNIRD NGINGHLRNS TFDVSYFGNR ESGIHGNSGL SLLSHHSMNP NPMNRSFVSS  300
QTQFHSLNQH ALPQHQFSYG RGAANQNYQR SQVRDPLMTR SLHNQTYMNG LKAQTFSSGP  360
YTENTYSKIP EHNTNIDSRV SSFLLFGGTP GLPKNNLFDV PGYLMPDGAS LSNLTTVFHN  420
DSMVNMVHTS LSVKDEMKNI IPLSVPSSNA EECPRIDQIS SLEELLETDA FCNFSSSSST  480
DEDLSVVFKR FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	2e-71	ARR-B family protein