PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026432048.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 710aa    MW: 77634.1 Da    PI: 6.1361
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026432048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.23.6e-28210263155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_026432048.1 210 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 263
                     79*******************.********************************8 PP
2Myb_DNA-binding37.94.1e-12212262148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+  ++t++++ s++qky+
   XP_026432048.1 212 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 262
                      678***********************************************7 PP
3Response_reg76.69e-26291371109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+ + +++l+++l++ +y +v++++++  al++l+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++a+g+   + + +  G
  XP_026432048.1  29 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 121
                     799********************.***************999889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_026432048.1 122 ACDYLLKPVRIEELKN 137
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    
MTVEESLIRG SSGSEDEQKI DLFPIGMRVL AVDDDLICLR VLESLLRRCQ YHVTTTTQAV  60
TALKMLRENR DKFDLVISDV QMPDMDGFKL LELVGLEMDL PVIMLSANGD TRNVMRGITH  120
GACDYLLKPV RIEELKNIWQ HVLRKKKVEP KDQNNLDKLN PGMGDSGKGH SVSGNDDQNK  180
LNRKRKDQNE EDDDECEDEN DNDDPSSQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI  240
LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA ALGGKDASYL RMGSLDGFGD  300
FHGFGGPGQL PNGSLASYSP VGMLGRLNTP VGIGLHGPSS GMMQLGRPQN PTNSVHDLGK  360
LRQSVIPGNQ NGNFLQGMPT PLELDQLQQS KSIARIGEFS SSIDPRAFPG PSSFPDTGVT  420
IANSNNSFQN VHSNSLLLLG GPQQTQSRAG FGNQSSVRMP SVNSESFEFG FGVSSHLPDL  480
GRCNDNWPTA APISGFPSNP LPLGDNPFSH ADLSSDILTD NISSINATIG NNSLDVSSNS  540
VTNQLDSRRD LQPGPIGVAQ HDKFSNFVNL GDNVGQSMNL VPKQKWISHK QDYNQTSNLL  600
FSSSSPSVPI HGVVDPLGQN STMSNRKTDL ISTSQPAAGS NSYFTRRNGI EKSSIGMTEN  660
FLLDQNRSQG GAVMSNSCGS LEDLMSAMIK REREELTPRD GDIFPVRTCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-131ARR-B family protein