PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026432762.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 524aa    MW: 60091.4 Da    PI: 9.8975
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026432762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.89.6e-142052841297
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     k+ ++ +p k ++++g     s  + l++ +g+ W+v+l  +++ g++++ kGW eF + + L++g ++ ++++g+s+f  +v++ 
  XP_026432762.1 205 KKYQMEIPVKVVRKIGRT--LSDIVALRTANGKLWNVEL--KRSEGKVWFHKGWMEFIEHHSLRDGHVLGITYNGNSQF--FVRIT 284
                     566799*********855..8889***************..**********************************9999..88875 PP
2B346.28.2e-15422516199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ff v ++ ++l++g l +p +fa+eh  +   +  k +++++++ ++W++ + yr++  r  l++GW +  ++    egD++vF++ +++++e++
  XP_026432762.1 422 FFAVCMRDSYLTNGYLLIPHSFAKEHlpK---NI-KNVMVRSSDDKVWTLGYYYRGYAAR--LSAGWTSLRRSLCPTEGDVCVFEVLKERDTEMR 510
                     788889999*****************432...33.48***************88888866..9**********************99999999** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v+v+r+
  XP_026432762.1 511 VSVYRE 516
                     **9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MDARQNFSRP SFFKMMTGDF QKKLKMPVNF IGTFNGMIPY DSNLRSPLGC WNVKVKEEEH  60
GGLSFRKGWP DFVEAHCLGH EDVVIMKYIG NSQFSVKLYG RNGCEKVLPS AGSNGVKSIS  120
SRKMIEYGET SKGKVITNYG TNFDRHKDRA DDIGRDSFCS DKRSCGLLKY DSLERKTTVR  180
GTGGEREECS RKGKPYFLVI WTEDKKYQME IPVKVVRKIG RTLSDIVALR TANGKLWNVE  240
LKRSEGKVWF HKGWMEFIEH HSLRDGHVLG ITYNGNSQFF VRITDVMERL DDSINQGESN  300
PKKRRRLSQR EKDNVILLDA PPSRAHVNSK TDEERAELSF PPGLEVPIQL NKNKGTKSLV  360
LHKTRSGERL PVAKEEEESE DTSDSPDASK LSRKSSRRSR SEGNERVAEV TKLFKRQTQN  420
PFFAVCMRDS YLTNGYLLIP HSFAKEHLPK NIKNVMVRSS DDKVWTLGYY YRGYAARLSA  480
GWTSLRRSLC PTEGDVCVFE VLKERDTEMR VSVYREIDNV LTRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301307PKKRRRL
2303307KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-29B3 family protein