PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432923.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 34290.9 Da PI: 4.5932

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	6e-19	60	113	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q+++Le+ Fe ++++ e++ +LA++l+L+ rqV vWFqNrRa++k XP_026432923.1 60 KKRRLSADQVRALEKNFEVENKLEPETKVKLAHELNLQPRQVAVWFQNRRARWK 113 56689************************************************9 PP
2	HD-ZIP_I/II	118.8	3e-38	59	150	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls++qv++LE++Fe e+kLepe Kv+la+eL+lqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd l+ + +L++ +e L el+ XP_026432923.1 59 EKKRRLSADQVRALEKNFEVENKLEPETKVKLAHELNLQPRQVAVWFQNRRARWKTKQLERDYGFLKANYDDLRLKFLELQQSKELLLLELH 150 69*********************************************************************************999987776 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKRLGSSDSL GGMISISPST DEKNSNNNSV VYSKGFQSMM VGLEEEDCLE ETGGYNIAEK 60 KRRLSADQVR ALEKNFEVEN KLEPETKVKL AHELNLQPRQ VAVWFQNRRA RWKTKQLERD 120 YGFLKANYDD LRLKFLELQQ SKELLLLELH ELKSKIKEDN TESNGSVKDE MLISEGENCK 180 VYVNHDEERA NYENNGRGIL MLGDVKDGSY DSSDTSAILN EDINNNNNYY SPAMPISSSP 240 TSAVCLQFSA SKTTSDHSIQ NQSHLQQTSV KMEDFGGEEP CDFFSDEQAP SLQWYCHEPW 300 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	89	KKRRLSADQVRALEKNFEVENKLEPETKVK
2	108	116	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	1e-59	HD-ZIP family protein