PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026433400.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 254aa    MW: 30056.5 Da    PI: 9.1478
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026433400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.92.3e-084584345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +WT++E   +++ ++++G+  Wk+ a  +g  + ++++k+ w+
   XP_026433400.1 45 NWTEDEKAFILRFHEKHGPL-WKSMADVLG--KNRYHVKDTWR 84
                     8*****************88.***999998..899****9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MILNCSKHPR LKGCWKEIGA ALPHRPWGAV YQRGHTLLER AETRNWTEDE KAFILRFHEK  60
HGPLWKSMAD VLGKNRYHVK DTWRRIHRAG LVKALKGKWS QAEYQSLFNL VNKDLRMHVY  120
EEKKSKHGMI RDNISWKAIG NRLATRTDMY CCLKWYKQLS SSMVQEGKWA DTDDYRLLDE  180
LLRLDACCVE DVDWDNLLEH RSGDITLKRW RRMVNHIGTH GLQSFAEQVE VLAERYYPEL  240
LEVREALDSR PVVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.14e-86MYB_related family protein