PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433859.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 258aa MW: 28385.9 Da PI: 9.4236

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00047	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk Fs+ L H +H XP_026433859.1 72 FECKTCGKGFSSFQALGGHRASH 94 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MVSIRNQKRF TTTGAAAARE SASMNNDSSM KMNSTEHPST ASMKMNSTEQ PSTESRVYDD 60 STEKQSMASR VFECKTCGKG FSSFQALGGH RASHKKLRLV KGDGSKMDGR LSSSSKSSSA 120 LHECSICGKG YAIGQALGGH MRRHRNNPSK ESPSRSLSVS PPSSPPPEEQ QLFSLPLLPH 180 SSSPLAEEPR LSLPLLPQTP EPKTLKRKYH AVHNDKRLCL DLNLGPPCSY YEEEIDSDDR 240 HHHQSMPTKP YLGLTLFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46090.1	1e-23	C2H2 family protein