PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433963.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 327aa MW: 37364.2 Da PI: 4.5004

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.6e-19	92	145	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t +q+e Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k XP_026433963.1 92 KKRRLTVDQVEFLERSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 145 56689************************************************9 PP
2	HD-ZIP_I/II	127.3	6.5e-41	91	180	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ekkrrl+ +qv++LE+sFe e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktk lEkdy++Lk++yd+lk + e+L ke+e+L++e XP_026433963.1 91 EKKRRLTVDQVEFLERSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKSLEKDYDSLKASYDTLKINYENLLKETEKLKTE 180 69*************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEGGRVYGGS NISSMLLQNQ RISSSSIVDN NNLLIPSSSS SAAAAAFPGS RSMVNFSDAN 60 GINFSGKSFF QSFDYDENGD EDFDEYFRQP EKKRRLTVDQ VEFLERSFEV ENKLEPERKV 120 QLAKDLGLQP RQVAIWFQNR RARWKTKSLE KDYDSLKASY DTLKINYENL LKETEKLKTE 180 ALTLTNQHLL NEKEMDNSES LHLIEQCHTR TQNFIPIEVF GERPLDVTSV VCKQESFNSS 240 NSDVVDTDSP RYINGLHSSA LLMEPANSSH VFEVDQSDLS QDEDENFSRN MLPAMYNFSK 300 PEEPNPPANS CNYGFLGEDQ PVWFWSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-38	HD-ZIP family protein