PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434297.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 513aa MW: 59525.1 Da PI: 6.976

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.1	1.3e-27	61	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA++vGFsvrk++ +k+k ++e++ r f+Cs+eg+re++ + + ++ra trtgC a+++++ ++d+++ + ++++eHnHel+ XP_026434297.1 61 EFYNAYARTVGFSVRKQSASKRKADKEVMGRIFCCSREGEREKHPRV--TPTKPRALTRTGCMARMQIRINDDETYSIVSFVTEHNHELS 148 6***************************************99877..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MEEQEKSYSI DLNETADPGE SISEENYVQT ITEVSVVTGN PMENDENIMG RTFKSDDDAY 60 EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRVTPT KPRALTRTGC 120 MARMQIRIND DETYSIVSFV TEHNHELSSQ DKVHLLRSQR KIQPAQATLI NNMVSAGFGA 180 TRIFSYMSEE AGGPQNLNFI QEDCNNLVQA KHIDYLKEGD AKVLLAYFKR KQKENKSFFY 240 TIQVGDDDRI MNYFWCDAKS RLDYSIFGDV VCFDTTFKTN GYDMPFAPIV GVNNHGQTIL 300 FGCALLKNET TDSFVWLFET FLDAMEGKEM KTIFTDQASQ MATAIKQVFP NDHHRLCLWH 360 IFQNAAKHLS NIFGTHKSFA SDFIKCIYDY ETEDEFLLGW EKLLETYDLK YNKWLNNLFK 420 LREKWSQVYG REHFCAGMTS TQRSESINNY FKKYFKKKQT LSEFVVQSNK AVDARREKAR 480 KADHKSVSTQ PDLTSIWEVE KKAVEIYTRK IFN

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MEEQEKSYSI DLNETADPGE SISEENYVQT ITEVSVVTGN PMENDENIMG RTFKSDDDAY  60
EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRVTPT KPRALTRTGC  120
MARMQIRIND DETYSIVSFV TEHNHELSSQ DKVHLLRSQR KIQPAQATLI NNMVSAGFGA  180
TRIFSYMSEE AGGPQNLNFI QEDCNNLVQA KHIDYLKEGD AKVLLAYFKR KQKENKSFFY  240
TIQVGDDDRI MNYFWCDAKS RLDYSIFGDV VCFDTTFKTN GYDMPFAPIV GVNNHGQTIL  300
FGCALLKNET TDSFVWLFET FLDAMEGKEM KTIFTDQASQ MATAIKQVFP NDHHRLCLWH  360
IFQNAAKHLS NIFGTHKSFA SDFIKCIYDY ETEDEFLLGW EKLLETYDLK YNKWLNNLFK  420
LREKWSQVYG REHFCAGMTS TQRSESINNY FKKYFKKKQT LSEFVVQSNK AVDARREKAR  480
KADHKSVSTQ PDLTSIWEVE KKAVEIYTRK IFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein