PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434385.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 205aa MW: 22836.9 Da PI: 4.6856

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.6e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e+ C ++ lC +C ++ H H+++pl XP_026434385.1 4 QCDVCEKAEAVVLCCADEAALCYNCDEKVHAAnklaskHQRIPL 47 7*****************************66889999998886 PP
2	zf-B_box	33.2	1.1e-10	55	95	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 +++ C+ ++ek +fC +++ llC++C +++H++ H+ XP_026434385.1 55 NQPSCDICQEKAGYFFCLEDRALLCRNCDVSIHSStqssHQ 95 6899*****************************77788887 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MKIQCDVCEK AEAVVLCCAD EAALCYNCDE KVHAANKLAS KHQRIPLLHN NHNRNQPSCD 60 ICQEKAGYFF CLEDRALLCR NCDVSIHSST QSSHQRFLLT GVKLNDFQQQ QQQITDSKPS 120 SLSYLNSSMT PSNANGSSSL NISSTTTDMN NNNSTFSDMN NNSTFSSDPH FSDWPSDEIF 180 TNSTNLDQNY EFSPSEFESS TISSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-48	DBB family protein