PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434535.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 34417.1 Da PI: 4.6005

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.6e-19	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q+++Le+ Fe ++++ e++ +LA++l+L+ rqV vWFqNrRa++k XP_026434535.1 61 KKRRLSADQVRALEKNFEVENKLEPETKVKLAHELNLQPRQVAVWFQNRRARWK 114 56689************************************************9 PP
2	HD-ZIP_I/II	119	2.5e-38	60	150	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrls++qv++LE++Fe e+kLepe Kv+la+eL+lqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd l+ + +L++ +e L el XP_026434535.1 60 EKKRRLSADQVRALEKNFEVENKLEPETKVKLAHELNLQPRQVAVWFQNRRARWKTKQLERDYGFLKANYDDLRLKFLELQQSKELLLLEL 150 69********************************************************************************999887666 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKRLGSSDSL GGLISISPST DEKNCNNSNS AVYSKGFQSM MVGLEEEDCL EETGGYNITE 60 KKRRLSADQV RALEKNFEVE NKLEPETKVK LAHELNLQPR QVAVWFQNRR ARWKTKQLER 120 DYGFLKANYD DLRLKFLELQ QSKELLLLEL HVLKSKMKEE NTESNGSVKD EMLISEEENC 180 KVYVNHDEER TNYENNGRSI LMFGDVKDGS SDSSDTSAIL NEEINNNNNY YSPAMPISSS 240 PTSAVCFQFS ASKTSDHSVQ NQSHLQQTSV KMEDFGAEEP CDFFSDEQAP SLQWYCHEPW 300 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	90	KKRRLSADQVRALEKNFEVENKLEPETKVK
2	109	117	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	8e-46	HD-ZIP family protein