PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026434793.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 250aa    MW: 27910 Da    PI: 6.744
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026434793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.44.1e-1753139191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY++++k  GF v+ks+s k+  +g i +++f+C + gk ++ ++k     r++a+ ++gC+akl+++++    ++++ l+leHnHel p
  XP_026434793.1  53 EFYKTFGKVKGFPVVKSTSVKN-GEGCIRSYKFTCARAGKCNSISEK---PLRPQATIKCGCQAKLVLRLDCLVGYVISLLNLEHNHELKP 139
                     6*****************9999.7888*************9998766...999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MHIEEVGESS NVESTLMQEE TFEKSECTDI SGIKPNIEPV IGMGFESIDD AWEFYKTFGK  60
VKGFPVVKST SVKNGEGCIR SYKFTCARAG KCNSISEKPL RPQATIKCGC QAKLVLRLDC  120
LVGYVISLLN LEHNHELKPE FARHFCCNRF INSGVKNQID LLDQSGIRLC KSYDICVNEA  180
GGHENMTCSQ KDCRNLIDKL RSARLGEGDA VVILKYFIKM GSQGLGFYLS VDIDDTGHLT  240
ILFWADGRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.19e-28FAR1 family protein