PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434840.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 380aa MW: 43576.8 Da PI: 5.7963

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.2e-17	59	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_026434840.1 59 RGPWTDEEDHLLTNYIANHGEGRWNSLAHAAGLKRTGKSCRLRWLNYL 106 89********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	112	155	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ +++++ q+G++ W++Ia++++ gRt++++k++w++ XP_026434840.1 112 RGNITPEEQLMILELHSQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 155 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYSSSTTMNN NRRSSAGGGG DSSSSSTTMT TTQSSSDNED MMMMTMDYEQ QQEDLDLRRG 60 PWTDEEDHLL TNYIANHGEG RWNSLAHAAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ 120 LMILELHSQW GNRWSKIAQY LPGRTDNEIK NYWRTRVQKH AKQLRCDVNS KLFKDTMRNV 180 WMPRLAERIQ AAADGTSLEA TNTITGHHFN NNIDFTSVAE STNINDMGMI NTNRTNRRRS 240 IKSEDNYTTA KVPASSSTAD SLWTNTGTTQ VPSPVSDLTY DQYQYPFEYN CESTTTQTSH 300 IMNYPEYIMP SPIGYNLNHD FNFQGCTTSS VHEQQNMSNI SGNWLGSDTS STITQDNSLW 360 DYLWNPNQDI MFIQQQQQQF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYSSSTTMNN NRRSSAGGGG DSSSSSTTMT TTQSSSDNED MMMMTMDYEQ QQEDLDLRRG  60
PWTDEEDHLL TNYIANHGEG RWNSLAHAAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ  120
LMILELHSQW GNRWSKIAQY LPGRTDNEIK NYWRTRVQKH AKQLRCDVNS KLFKDTMRNV  180
WMPRLAERIQ AAADGTSLEA TNTITGHHFN NNIDFTSVAE STNINDMGMI NTNRTNRRRS  240
IKSEDNYTTA KVPASSSTAD SLWTNTGTTQ VPSPVSDLTY DQYQYPFEYN CESTTTQTSH  300
IMNYPEYIMP SPIGYNLNHD FNFQGCTTSS VHEQQNMSNI SGNWLGSDTS STITQDNSLW  360
DYLWNPNQDI MFIQQQQQQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	1e-83	MYB family protein