PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434977.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 915aa MW: 102659 Da PI: 6.6703

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158.5	1.3e-49	30	146	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+e ++rwl+++ei+a+L n + ++++ ++ + pksg+++L++rk++r+fr+DG++wkkkkdgktv+E+he+LKvg+ e +++yYah+ + ptf XP_026434977.1 30 LEEaSSRWLRPNEIHAVLYNSSLFTIHVKPMNLPKSGTVVLFDRKMLRNFRRDGHNWKKKKDGKTVKEAHEHLKVGTEERIHVYYAHGLDSPTFV 124 455599*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL++++e+ivlvhy+e+ XP_026434977.1 125 RRCYWLLDKKYENIVLVHYRET 146 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MANSGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM 60 NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS 120 PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT 180 GANNAGAGSY FVNKPIQLDD NVTENYNVKT LHEINTLDWD DLLVTNEPIG STHETDNFSC 240 LEEWNQNESK YNSGLLPSDN VNKHDSSFHG STNTTSVHPS IDGTLPTGGH FQTVVTQANS 300 NVGKEGFEPM VEGADGLLAQ DSFGRWMNYV MTESPGSLDN PSGGSSISNG YGSNINGEVD 360 HHHSSMHKQV FTITEISPTW AFSSEETKVI VIGYFNGGPS HLADSDLLMI LGDECVPAEM 420 IQHGVYRCKA LPHSPGLVNL HLSMDGQTPI SQVMSFEYRS PSVVNEVASP NDEPSRDEFQ 480 IQIRLAHLLF SSSNSLSILS NKASPTVLKE AKKFAHSTSS IIKDWDYLIK SAMNNDISFQ 540 QAQKSLFEIT LKNKLHEWLL ERVIEGSKIS ARDHQGLGII HLCAILGYTW AVRPFSRSGL 600 SLDFRDSRGW TALHYAAHFG REEMVAVLLS SGANPSLVTD PTSEFPGGCT SADLAAQNGY 660 EGLAAYLAEK GLTEHFKRMS LSGNISGSLQ TSSTDIVDPS GLNEEELCQK DTLTAYRTAA 720 DAAARIQAAF RENTLKLKTE AVNQANPELE ARNIISAMRI QRAFRNYESR RQMAAAARIQ 780 YTYRTWKIRK EFLYLRRQTI KIQAAFRGLQ ARKNYRKICW SVGVLEKAIM RWRKKRKGLR 840 GLQVEPTMVD AVDPNDENVV EDFFIISRKQ AEDRVERSVV RVQALFRSYR AQQQYRRMKL 900 ACDQAELDEL FEPDL

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MANSGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM  60
NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS  120
PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT  180
GANNAGAGSY FVNKPIQLDD NVTENYNVKT LHEINTLDWD DLLVTNEPIG STHETDNFSC  240
LEEWNQNESK YNSGLLPSDN VNKHDSSFHG STNTTSVHPS IDGTLPTGGH FQTVVTQANS  300
NVGKEGFEPM VEGADGLLAQ DSFGRWMNYV MTESPGSLDN PSGGSSISNG YGSNINGEVD  360
HHHSSMHKQV FTITEISPTW AFSSEETKVI VIGYFNGGPS HLADSDLLMI LGDECVPAEM  420
IQHGVYRCKA LPHSPGLVNL HLSMDGQTPI SQVMSFEYRS PSVVNEVASP NDEPSRDEFQ  480
IQIRLAHLLF SSSNSLSILS NKASPTVLKE AKKFAHSTSS IIKDWDYLIK SAMNNDISFQ  540
QAQKSLFEIT LKNKLHEWLL ERVIEGSKIS ARDHQGLGII HLCAILGYTW AVRPFSRSGL  600
SLDFRDSRGW TALHYAAHFG REEMVAVLLS SGANPSLVTD PTSEFPGGCT SADLAAQNGY  660
EGLAAYLAEK GLTEHFKRMS LSGNISGSLQ TSSTDIVDPS GLNEEELCQK DTLTAYRTAA  720
DAAARIQAAF RENTLKLKTE AVNQANPELE ARNIISAMRI QRAFRNYESR RQMAAAARIQ  780
YTYRTWKIRK EFLYLRRQTI KIQAAFRGLQ ARKNYRKICW SVGVLEKAIM RWRKKRKGLR  840
GLQVEPTMVD AVDPNDENVV EDFFIISRKQ AEDRVERSVV RVQALFRSYR AQQQYRRMKL  900
ACDQAELDEL FEPDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein