PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434989.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 365aa MW: 41367.1 Da PI: 4.8655

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.1	1.8e-14	61	151	5	97
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++ ++ ++++p +f++e+g + s +l+ + g++W v+++ + +s+ +++++G keF k+ + g f+vFk++g+s f v +f XP_026434989.1 61 IVHNHLVQNEQIRIPQRFIREYGDD--LSNHAVLTVSGGKEWFVEMKRDSNSDDggVYFKNGLKEFYKSYSITPGTFLVFKYEGNSHF--DVVIF 151 45778889999*********988..7889***********7744444467**************************9999..55555 PP
2	B3	38.6	1.9e-12	267	349	6	87
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ ++ l +p +f + ++ k e++ l + e grsW v + ++++ + + + kG ++F ++n+LkegD++vF+++ + XP_026434989.1 267 LQPSYVDHKYLPIPSDFEGKEELGKLETIRLDVVEEYGRSWIVHVFTNGRDLQgIRFCKGVSRFPRDNNLKEGDVCVFEMVTK 349 4445555556*****8777888889999***********5544443359999*******************7753 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ 60 IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG 120 LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT 180 DDTINAEDDV DDKDDYYVEA SEADANDDND ESGDDSDDEE CGQIRVGLTR EKNRSITARG 240 LETHDRAIGI KRGFKSSKQY PFFAIGLQPS YVDHKYLPIP SDFEGKEELG KLETIRLDVV 300 EEYGRSWIVH VFTNGRDLQG IRFCKGVSRF PRDNNLKEGD VCVFEMVTKK KSSSIKYARV 360 HIFRS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ  60
IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG  120
LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT  180
DDTINAEDDV DDKDDYYVEA SEADANDDND ESGDDSDDEE CGQIRVGLTR EKNRSITARG  240
LETHDRAIGI KRGFKSSKQY PFFAIGLQPS YVDHKYLPIP SDFEGKEELG KLETIRLDVV  300
EEYGRSWIVH VFTNGRDLQG IRFCKGVSRF PRDNNLKEGD VCVFEMVTKK KSSSIKYARV  360
HIFRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-20	B3 family protein