PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434992.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 364aa MW: 41238 Da PI: 4.9259

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.1	1.8e-14	61	151	5	97
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++ ++ ++++p +f++e+g + s +l+ + g++W v+++ + +s+ +++++G keF k+ + g f+vFk++g+s f v +f XP_026434992.1 61 IVHNHLVQNEQIRIPQRFIREYGDD--LSNHAVLTVSGGKEWFVEMKRDSNSDDggVYFKNGLKEFYKSYSITPGTFLVFKYEGNSHF--DVVIF 151 45778889999*********988..7889***********7744444467**************************9999..55555 PP
2	B3	38.6	1.9e-12	266	348	6	87
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ ++ l +p +f + ++ k e++ l + e grsW v + ++++ + + + kG ++F ++n+LkegD++vF+++ + XP_026434992.1 266 LQPSYVDHKYLPIPSDFEGKEELGKLETIRLDVVEEYGRSWIVHVFTNGRDLQgIRFCKGVSRFPRDNNLKEGDVCVFEMVTK 348 4445555556*****8777888889999***********5544443359999*******************7753 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ 60 IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG 120 LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT 180 DDTINAEDDV DDKDDYYVEA SADANDDNDE SGDDSDDEEC GQIRVGLTRE KNRSITARGL 240 ETHDRAIGIK RGFKSSKQYP FFAIGLQPSY VDHKYLPIPS DFEGKEELGK LETIRLDVVE 300 EYGRSWIVHV FTNGRDLQGI RFCKGVSRFP RDNNLKEGDV CVFEMVTKKK SSSIKYARVH 360 IFRS

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ  60
IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG  120
LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT  180
DDTINAEDDV DDKDDYYVEA SADANDDNDE SGDDSDDEEC GQIRVGLTRE KNRSITARGL  240
ETHDRAIGIK RGFKSSKQYP FFAIGLQPSY VDHKYLPIPS DFEGKEELGK LETIRLDVVE  300
EYGRSWIVHV FTNGRDLQGI RFCKGVSRFP RDNNLKEGDV CVFEMVTKKK SSSIKYARVH  360
IFRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-20	B3 family protein