PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434999.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 363aa MW: 41166.9 Da PI: 4.9259

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.1	1.8e-14	61	151	5	97
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++ ++ ++++p +f++e+g + s +l+ + g++W v+++ + +s+ +++++G keF k+ + g f+vFk++g+s f v +f XP_026434999.1 61 IVHNHLVQNEQIRIPQRFIREYGDD--LSNHAVLTVSGGKEWFVEMKRDSNSDDggVYFKNGLKEFYKSYSITPGTFLVFKYEGNSHF--DVVIF 151 45778889999*********988..7889***********7744444467**************************9999..55555 PP
2	B3	38.6	1.9e-12	265	347	6	87
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ ++ l +p +f + ++ k e++ l + e grsW v + ++++ + + + kG ++F ++n+LkegD++vF+++ + XP_026434999.1 265 LQPSYVDHKYLPIPSDFEGKEELGKLETIRLDVVEEYGRSWIVHVFTNGRDLQgIRFCKGVSRFPRDNNLKEGDVCVFEMVTK 347 4445555556*****8777888889999***********5544443359999*******************7753 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ 60 IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG 120 LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT 180 DDTINAEDDV DDKDDYYVEA SDANDDNDES GDDSDDEECG QIRVGLTREK NRSITARGLE 240 THDRAIGIKR GFKSSKQYPF FAIGLQPSYV DHKYLPIPSD FEGKEELGKL ETIRLDVVEE 300 YGRSWIVHVF TNGRDLQGIR FCKGVSRFPR DNNLKEGDVC VFEMVTKKKS SSIKYARVHI 360 FRS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNPSNGNRCS SRNSTGSTSG QRNTTTLTKN NDDGSDSSRA SYHSDMRDDT VYMGGPGFCQ  60
IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYFKNG  120
LKEFYKSYSI TPGTFLVFKY EGNSHFDVVI FQMSGTEIDY SSFNNNNNNN NHMEETSSQT  180
DDTINAEDDV DDKDDYYVEA SDANDDNDES GDDSDDEECG QIRVGLTREK NRSITARGLE  240
THDRAIGIKR GFKSSKQYPF FAIGLQPSYV DHKYLPIPSD FEGKEELGKL ETIRLDVVEE  300
YGRSWIVHVF TNGRDLQGIR FCKGVSRFPR DNNLKEGDVC VFEMVTKKKS SSIKYARVHI  360
FRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-20	B3 family protein