PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026435112.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 583aa    MW: 66112.2 Da    PI: 6.5468
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026435112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS45.51.2e-1477156179
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseela 79 
                     +++lL++cAe vs++d+++a++l++ ls+ ++p gd+++Rl++ f +AL+ r++r+ +++  a ++ +  ++n  +++ +
  XP_026435112.1  77 MRKLLISCAELVSQSDFSAAHRLVSLLSTSSTPFGDSTERLVHQFSKALSLRINRHHNNTNTATATANFIRSNlLTDSDH 156
                     589****************************************************8888888887777766665333333 PP
2GRAS330.43.3e-10122858273373
            GRAS  73 nsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....................ppslRiTgv 147
                     n+ +  +++ ++++++P+++fshltaNqaIlea+eg+e +Hi+Dfd +qG+QWp+L+qa+a+R                       pp++RiTg 
  XP_026435112.1 228 NHGDLQSSYLYLNQITPFIRFSHLTANQAILEAIEGQESIHILDFDTMQGVQWPPLMQAIADRYYTssslsssdtptssslphppvPPMIRITGT 322
                     46667788899****************************************************9444578889999******************* PP

            GRAS 148 gspesgskeeleetgerLakfAeelgvpfefnvl.....vakrledleleeLrvkpgEalaVnlvlqlhrll....................... 214
                     g+    + ++l++tg+rL++fA++lg++f+f++l       ++++   ++++++ p+E+laVn+vl lh+ll                       
  XP_026435112.1 323 GQ----DIDTLRKTGDRLQRFAQSLGLRFQFHPLilllnDPSSVALQLPSAIALLPHETLAVNCVLYLHKLLssrdddhhhhphdqqyynqqqnt 413
                     **....9**************************97743222244444678899999*************************************** PP

            GRAS 215 ........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
                             +++ + ++    +L+++ks++Pkvv+v+e+ea+ n+++F++rf+eal++y+alf+slea+lp++s+er +vE++++grei ++v++e
  XP_026435112.1 414 tryyysssSSRRDDDDGVCLFLRTIKSMNPKVVTVAEREASNNHPNFMKRFVEALDHYTALFNSLEATLPPNSQERLTVEQVWFGREIADIVSAE 508
                     ****9765333444446778*************************************************************************** PP

            GRAS 302 gaerrerhetlek.WrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     g+errerhe+le+ W e+l+++GF+ +pls +a +qaklllr ++ s+gy+++  ++s++lgW++++L++vS+W
  XP_026435112.1 509 GEERRERHERLESyWVEKLTSSGFTRLPLSPYALSQAKLLLRLHYpSEGYQLQILNDSFFLGWQNQSLFTVSSW 582
                     **********9866************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    
MLSSSSFSTD GNNNSHEDKK DQDRHRTLDH RHHGGGHHLS PASYQLPQYD HHELIPHQLQ  60
PTVSSHLRYE DQNHHQMRKL LISCAELVSQ SDFSAAHRLV SLLSTSSTPF GDSTERLVHQ  120
FSKALSLRIN RHHNNTNTAT ATANFIRSNL LTDSDHHHHH QYYSAPIVAG ASASAASRTT  180
STIAMVNLIN NPSVSTSASD AVDLGNHQIH ELHNDEVVDI DHDINNDNHG DLQSSYLYLN  240
QITPFIRFSH LTANQAILEA IEGQESIHIL DFDTMQGVQW PPLMQAIADR YYTSSSLSSS  300
DTPTSSSLPH PPVPPMIRIT GTGQDIDTLR KTGDRLQRFA QSLGLRFQFH PLILLLNDPS  360
SVALQLPSAI ALLPHETLAV NCVLYLHKLL SSRDDDHHHH PHDQQYYNQQ QNTTRYYYSS  420
SSSRRDDDDG VCLFLRTIKS MNPKVVTVAE REASNNHPNF MKRFVEALDH YTALFNSLEA  480
TLPPNSQERL TVEQVWFGRE IADIVSAEGE ERRERHERLE SYWVEKLTSS GFTRLPLSPY  540
ALSQAKLLLR LHYPSEGYQL QILNDSFFLG WQNQSLFTVS SWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-97GRAS family protein