PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435307.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 411aa MW: 45756.8 Da PI: 4.2901

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.8	6.1e-37	129	232	1	97
DUF573 1 klfqrlwseeDeivlLqGlidf.kaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 klfqrlw++eDei lLqG++++ ++++g+ s+++d+ fy+++k +++++++k+qlveK+rrLKkK+++ +++++sgk+ +f+++hdq++ XP_026435307.1 129 KLFQRLWTDEDEIGLLQGFLEYnTKERGTgtknssSYHHDTGPFYDQIKTKLQLEFNKNQLVEKLRRLKKKYRNVMSRVSSGKDLVFKTPHDQSC 223 579*****************54556666688755667**************************************************** PP DUF573 89 felskkiWg 97 fe+skkiWg XP_026435307.1 224 FEISKKIWG 232 ******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MPEEEDQNMN TNQEEEEDFD DEEDEELEED EDMEEYDEDE DLELDSPTTS SDPIPQQPAI 60 PNIATTTPVV STSVSTTTTT TPAIATTITT AQTGGEPEIK RQKIEEPITP MAITTTTEER 120 KPPSTEERKL FQRLWTDEDE IGLLQGFLEY NTKERGTGTK NSSSYHHDTG PFYDQIKTKL 180 QLEFNKNQLV EKLRRLKKKY RNVMSRVSSG KDLVFKTPHD QSCFEISKKI WGAETGGNVV 240 VSGGDVEEED GNPNPLQIIE VKNVTVGNNG GVAADINGSE KQAIPRSRKR IRKRTEVPPN 300 VSNPLNIPVN LSVSSVIEET VKSCLSPLFK ELLQAAISGP NNVRGLGVMG LNPLNLGANS 360 SSSSMNLLSG EMVDEKWKKQ QVLELEVYAK RMDLVQDQIK LALEELRSTG D

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MPEEEDQNMN TNQEEEEDFD DEEDEELEED EDMEEYDEDE DLELDSPTTS SDPIPQQPAI  60
PNIATTTPVV STSVSTTTTT TPAIATTITT AQTGGEPEIK RQKIEEPITP MAITTTTEER  120
KPPSTEERKL FQRLWTDEDE IGLLQGFLEY NTKERGTGTK NSSSYHHDTG PFYDQIKTKL  180
QLEFNKNQLV EKLRRLKKKY RNVMSRVSSG KDLVFKTPHD QSCFEISKKI WGAETGGNVV  240
VSGGDVEEED GNPNPLQIIE VKNVTVGNNG GVAADINGSE KQAIPRSRKR IRKRTEVPPN  300
VSNPLNIPVN LSVSSVIEET VKSCLSPLFK ELLQAAISGP NNVRGLGVMG LNPLNLGANS  360
SSSSMNLLSG EMVDEKWKKQ QVLELEVYAK RMDLVQDQIK LALEELRSTG D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-65	GeBP family protein