PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435352.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 501aa MW: 55771.6 Da PI: 4.8672

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEd +l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_026435352.1 14 RGRWTTEEDTILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	48.1	2.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +t+E++ +++++ lG++ W+ Ia +++ gRt++++k++w+++l XP_026435352.1 67 RGNISTQEEDMIIKLHSTLGNK-WSVIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MGRAPCCEKV GLKRGRWTTE EDTILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI STQEEDMIIK LHSTLGNKWS VIAGHLPGRT DNEIKNYWNS HLSRRIHTFR 120 RPLHYSKETP SLVTVDTTKL KSTNGDKTYK GGKKSRGNMK KNKLIPSSNN MATRMAERKT 180 TDDDPDHRKS GCEDDVMITA TPISPQEKNT QMMDVLRQVE KERQRTNMDS CDQRDQGKEA 240 IVISGPFHDE VGGILGHSGG SEHQGKGDSI LMLCTSEEEM ESGLLNSPYV EQVLLASSIF 300 CSNEELIMGN ENLGPSSDID GHNGPNNGHT FSDGAGKRVM GGSNISDDQN HDFVQNELIK 360 NLMEYSSSSS SSSSSSHDQA EIVCDDQVFV SSSNNISDMQ HGSHELCPSS SMNSTTTSSS 420 FTTINTDEIE DSEWVYNWDF DMGNATVDMD LKATSAVWDI EKEELLSWLW ENDDTGDDAA 480 ATIPESEKQQ ALADWFLSLT R

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MGRAPCCEKV GLKRGRWTTE EDTILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI STQEEDMIIK LHSTLGNKWS VIAGHLPGRT DNEIKNYWNS HLSRRIHTFR  120
RPLHYSKETP SLVTVDTTKL KSTNGDKTYK GGKKSRGNMK KNKLIPSSNN MATRMAERKT  180
TDDDPDHRKS GCEDDVMITA TPISPQEKNT QMMDVLRQVE KERQRTNMDS CDQRDQGKEA  240
IVISGPFHDE VGGILGHSGG SEHQGKGDSI LMLCTSEEEM ESGLLNSPYV EQVLLASSIF  300
CSNEELIMGN ENLGPSSDID GHNGPNNGHT FSDGAGKRVM GGSNISDDQN HDFVQNELIK  360
NLMEYSSSSS SSSSSSHDQA EIVCDDQVFV SSSNNISDMQ HGSHELCPSS SMNSTTTSSS  420
FTTINTDEIE DSEWVYNWDF DMGNATVDMD LKATSAVWDI EKEELLSWLW ENDDTGDDAA  480
ATIPESEKQQ ALADWFLSLT R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-74	MYB family protein