PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435368.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 446aa MW: 49924.1 Da PI: 7.9196

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_026435368.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.9	5.4e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_026435368.1 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVEVNGEEKA PTTTATATTT TINNGNNNTH GNKSPGGGFS TNDQMMMKFL 180 KVDNSKQLGL TVQEGSNSMN NIVTPTKDFF LDRPSSSSDT MVGYYPLHQL NYGSASSPNN 240 QNQSLWFNQD TTRPFDSNSS ISAVLPLVPT TSIHPTQLGL KPANSSVTTL DTLHQQPDSF 300 NLNGVHSYWE NGTSSTNNSS ISSGSSSIEL HNNQSSNNHI SNNNNNNNSF WFESEPEEIK 360 WSEYLQNPFL MASAASTQTS TPPQQQQQQQ PIYNEIIKSE TQFMNNDGLS TTSWHHQNPQ 420 QQFLQAATGD IYSKDFQRLA AALGQI

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLS EVEVNGEEKA PTTTATATTT TINNGNNNTH GNKSPGGGFS TNDQMMMKFL  180
KVDNSKQLGL TVQEGSNSMN NIVTPTKDFF LDRPSSSSDT MVGYYPLHQL NYGSASSPNN  240
QNQSLWFNQD TTRPFDSNSS ISAVLPLVPT TSIHPTQLGL KPANSSVTTL DTLHQQPDSF  300
NLNGVHSYWE NGTSSTNNSS ISSGSSSIEL HNNQSSNNHI SNNNNNNNSF WFESEPEEIK  360
WSEYLQNPFL MASAASTQTS TPPQQQQQQQ PIYNEIIKSE TQFMNNDGLS TTSWHHQNPQ  420
QQFLQAATGD IYSKDFQRLA AALGQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	6e-91	MYB family protein