PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435622.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CO-like

Protein Properties

Length: 423aa MW: 46717.5 Da PI: 4.7675

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.2e-06	2	34	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 ++ C++++ +++ +C+ ++ lC +C + H+ XP_026435622.1 2 NPLCQLCGIEKALVYCTPDDARLCLQCDTVVHS 34 579***999****************9995 PP
2	CCT	64.1	4.1e-22	367	410	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Re+a++RYkeK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_026435622.1 367 REKAKMRYKEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 410 99***************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MNPLCQLCGI EKALVYCTPD DARLCLQCDT VVHSANRLSL RHLRGIMCDR CYSRPASIRC 60 TENSFSFCEN CRSNQKGCLV PSHPHLELPC YPLCPSGPEF LKLFPFAFDA SFLNGADSGP 120 LLSVSGGILS TIEHCLSNGW DSGENGNSVV NVLNDMGPCT KFEPSINPPI AFENTPSSMS 180 YNKNQPDLFQ KETDFSPEGL SQFKDIELCE DDDICEGFNI ADVDLSFDGD NLFGCAQSNP 240 KFIPGMDCFN LDKDIQVVDS LHLHENDIEV SSSMQPDCVG LQSPCVTGSV SVSQCVNSSM 300 DEVLLNATGG NRSINLSFSN EPQTLSLSNI TGERRVCDYQ DCGVSSMFLT GESSWDPSLE 360 TGSPQAREKA KMRYKEKKKT RTFGKQIRYA SRKARADTRK RVKGRFVKAG EAYDYDPLPS 420 RDY

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MNPLCQLCGI EKALVYCTPD DARLCLQCDT VVHSANRLSL RHLRGIMCDR CYSRPASIRC  60
TENSFSFCEN CRSNQKGCLV PSHPHLELPC YPLCPSGPEF LKLFPFAFDA SFLNGADSGP  120
LLSVSGGILS TIEHCLSNGW DSGENGNSVV NVLNDMGPCT KFEPSINPPI AFENTPSSMS  180
YNKNQPDLFQ KETDFSPEGL SQFKDIELCE DDDICEGFNI ADVDLSFDGD NLFGCAQSNP  240
KFIPGMDCFN LDKDIQVVDS LHLHENDIEV SSSMQPDCVG LQSPCVTGSV SVSQCVNSSM  300
DEVLLNATGG NRSINLSFSN EPQTLSLSNI TGERRVCDYQ DCGVSSMFLT GESSWDPSLE  360
TGSPQAREKA KMRYKEKKKT RTFGKQIRYA SRKARADTRK RVKGRFVKAG EAYDYDPLPS  420
RDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	3e-58	CO-like family protein