PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436042.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 540aa    MW: 60383.6 Da    PI: 5.728
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.81.1e-1141685391374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d   a+alL++l+++a   g+++qR+ ++f+++La rl+  +  + + ++++s++++ +  +++  al+l +e++P ++f
  XP_026436042.1 168 LVQLLFSCAEAVACRDRCHASALLSELRNNAKIFGTSFQRVSSCFVQGLADRLSLvQPLGAVGIVTTSDSTSAKsLDKKQEALSLVYEICPHIQF 262
                     689**************************************************99333345555555555544458888899999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h++aN  Ilea+ege+ vH++D+++    ++GlQW  L+++La+R+++pp  +RiTgvg+    s+  l+++ge L+ +A++lg++fef++ v+
  XP_026436042.1 263 GHFVANLSILEAFEGESFVHVVDLGMtlglQYGLQWHGLIDSLANRAGEPPrGIRITGVGN----STMHLRSIGEELEVYARSLGLNFEFSL-VE 352
                     ***********************976222268899************777768********....99************************9.8* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     ++le+l+ e++++ +gE+++Vn++lqlh +++es    +   +vL+++ +l P+v+v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ 
  XP_026436042.1 353 SNLEKLKKEDFNLYEGEVVVVNSILQLHCVVKESRGALN---SVLQVIHELCPRVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDTMLPKY 444
                     *******************************88877777...8**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     + +r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+p+p++  + +qak  l+k +  +gy++ ee+g+lvlgWk++p+v++S+
  XP_026436042.1 445 HTKRAKIEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQPAPIK--IISQAKQWLEKLNvCEGYTIVEEKGCLVLGWKSKPIVAASC 537
                     **************************************************95..89*************************************** PP

            GRAS 373 Wr 374
                     W+
  XP_026436042.1 538 WK 539
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    
MKFSKSMTPT SDLCLRHEFF DDDEDEEESV MECKEEKVSN LLDMSHSAMA SYPISAYLSI  60
LDNSNCLFSS SASASPKMSH KRLRKTPNSE ESIGSNDTPL SNSSNGSINH GDSSASLISL  120
PRLQFRDHIS TYKERYFAAE AMEEAATAMI GRDVEYRDEE VNEDGIKLVQ LLFSCAEAVA  180
CRDRCHASAL LSELRNNAKI FGTSFQRVSS CFVQGLADRL SLVQPLGAVG IVTTSDSTSA  240
KSLDKKQEAL SLVYEICPHI QFGHFVANLS ILEAFEGESF VHVVDLGMTL GLQYGLQWHG  300
LIDSLANRAG EPPRGIRITG VGNSTMHLRS IGEELEVYAR SLGLNFEFSL VESNLEKLKK  360
EDFNLYEGEV VVVNSILQLH CVVKESRGAL NSVLQVIHEL CPRVLVLVEQ DSSHNGPFFL  420
GRFMEALHYY SAIFDSLDTM LPKYHTKRAK IEQFYFAEEI KNIVSCEGPA RVERHEKVDQ  480
WRRRMSRAGF QPAPIKIISQ AKQWLEKLNV CEGYTIVEEK GCLVLGWKSK PIVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-81GRAS family protein