PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436043.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 497aa    MW: 55530.6 Da    PI: 7.6898
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.28.5e-1151254961374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d   a+alL++l+++a   g+++qR+ ++f+++La rl+  +  + + ++++s++++ +  +++  al+l +e++P ++f
  XP_026436043.1 125 LVQLLFSCAEAVACRDRCHASALLSELRNNAKIFGTSFQRVSSCFVQGLADRLSLvQPLGAVGIVTTSDSTSAKsLDKKQEALSLVYEICPHIQF 219
                     689**************************************************99333345555555555544458888899999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h++aN  Ilea+ege+ vH++D+++    ++GlQW  L+++La+R+++pp  +RiTgvg+    s+  l+++ge L+ +A++lg++fef++ v+
  XP_026436043.1 220 GHFVANLSILEAFEGESFVHVVDLGMtlglQYGLQWHGLIDSLANRAGEPPrGIRITGVGN----STMHLRSIGEELEVYARSLGLNFEFSL-VE 309
                     ***********************976222268899************777768********....99************************9.8* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     ++le+l+ e++++ +gE+++Vn++lqlh +++es    +   +vL+++ +l P+v+v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ 
  XP_026436043.1 310 SNLEKLKKEDFNLYEGEVVVVNSILQLHCVVKESRGALN---SVLQVIHELCPRVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDTMLPKY 401
                     *******************************88877777...8**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     + +r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+p+p++  + +qak  l+k +  +gy++ ee+g+lvlgWk++p+v++S+
  XP_026436043.1 402 HTKRAKIEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQPAPIK--IISQAKQWLEKLNvCEGYTIVEEKGCLVLGWKSKPIVAASC 494
                     **************************************************95..89*************************************** PP

            GRAS 373 Wr 374
                     W+
  XP_026436043.1 495 WK 496
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MSSSMMMKTK KRVSWSVKKK SNCLFSSSAS ASPKMSHKRL RKTPNSEESI GSNDTPLSNS  60
SNGSINHGDS SASLISLPRL QFRDHISTYK ERYFAAEAME EAATAMIGRD VEYRDEEVNE  120
DGIKLVQLLF SCAEAVACRD RCHASALLSE LRNNAKIFGT SFQRVSSCFV QGLADRLSLV  180
QPLGAVGIVT TSDSTSAKSL DKKQEALSLV YEICPHIQFG HFVANLSILE AFEGESFVHV  240
VDLGMTLGLQ YGLQWHGLID SLANRAGEPP RGIRITGVGN STMHLRSIGE ELEVYARSLG  300
LNFEFSLVES NLEKLKKEDF NLYEGEVVVV NSILQLHCVV KESRGALNSV LQVIHELCPR  360
VLVLVEQDSS HNGPFFLGRF MEALHYYSAI FDSLDTMLPK YHTKRAKIEQ FYFAEEIKNI  420
VSCEGPARVE RHEKVDQWRR RMSRAGFQPA PIKIISQAKQ WLEKLNVCEG YTIVEEKGCL  480
VLGWKSKPIV AASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-81GRAS family protein