PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436044.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 437aa    MW: 48524.9 Da    PI: 5.4663
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS184.57.2e-571683911222
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d   a+alL++l+++a   g+++qR+ ++f+++La rl+  +  + + ++++s++++ +  +++  al+l +e++P ++f
  XP_026436044.1 168 LVQLLFSCAEAVACRDRCHASALLSELRNNAKIFGTSFQRVSSCFVQGLADRLSLvQPLGAVGIVTTSDSTSAKsLDKKQEALSLVYEICPHIQF 262
                     689**************************************************99333345555555555544458888899999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h++aN  Ilea+ege+ vH++D+++    ++GlQW  L+++La+R+++pp  +RiTgvg+    s+  l+++ge L+ +A++lg++fef++ v+
  XP_026436044.1 263 GHFVANLSILEAFEGESFVHVVDLGMtlglQYGLQWHGLIDSLANRAGEPPrGIRITGVGN----STMHLRSIGEELEVYARSLGLNFEFSL-VE 352
                     ***********************976222268899************777768********....99************************9.8* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsles 222
                     ++le+l+ e++++ +gE+++Vn++lqlh +++es    +
  XP_026436044.1 353 SNLEKLKKEDFNLYEGEVVVVNSILQLHCVVKESRGALN 391
                     *****************************9988765544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MKFSKSMTPT SDLCLRHEFF DDDEDEEESV MECKEEKVSN LLDMSHSAMA SYPISAYLSI  60
LDNSNCLFSS SASASPKMSH KRLRKTPNSE ESIGSNDTPL SNSSNGSINH GDSSASLISL  120
PRLQFRDHIS TYKERYFAAE AMEEAATAMI GRDVEYRDEE VNEDGIKLVQ LLFSCAEAVA  180
CRDRCHASAL LSELRNNAKI FGTSFQRVSS CFVQGLADRL SLVQPLGAVG IVTTSDSTSA  240
KSLDKKQEAL SLVYEICPHI QFGHFVANLS ILEAFEGESF VHVVDLGMTL GLQYGLQWHG  300
LIDSLANRAG EPPRGIRITG VGNSTMHLRS IGEELEVYAR SLGLNFEFSL VESNLEKLKK  360
EDFNLYEGEV VVVNSILQLH CVVKESRGAL NSVLQAGLWR LYITTLLYLT LSTQCYLSTI  420
RNVLRSNNST LRKRLRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-35GRAS family protein