PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436162.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 304aa MW: 35131.5 Da PI: 8.1699

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	36	81	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026436162.1 36 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 81 899***************************.*********996 PP
2	Myb_DNA-binding	56	9e-18	88	131	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++++++E+++l da++++G++ W+tIar + gRt++++k++w+ XP_026436162.1 88 RKAFSEDEEQRLMDAHRLYGNK-WATIARLFH-GRTDNSVKNHWHV 131 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MECNNQNSRD LDGEYHNYHR QNSVSNNNGQ SKLCSRGHWR PAEDSKLKEL VALYGPQNWN 60 LIAEKLEGRS GKSCRLRWFN QLDPMITRKA FSEDEEQRLM DAHRLYGNKW ATIARLFHGR 120 TDNSVKNHWH VIMARKYRER STSSSSYRRR ESTSFLHESS SSYLGSSMNN NRFCEDHLQS 180 PPPAPPRDFF SAAGQKDHIR CTWEVQPRND YCSNFMLPPT STYYHDSMHH HDLLQQEQQQ 240 YQPTTYSHSS SRTSTSHVSV SDHFQASSSS SVDNNNNNNR VIATTYVDTT VTPPFIDFLG 300 VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	5e-63	MYB family protein